This script was not referenced anywhere in the codebase and used an outdated approach for credential management. Current workflow bakes credentials into Docker image from .env file in project root.
25 lines
1.1 KiB
Plaintext
25 lines
1.1 KiB
Plaintext
# Copy this file to .env and fill in your credentials
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# The .env file will be baked into the Docker image during build
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# Optional: Twilio credentials for SMS notifications
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TWILIO_ACCOUNT_SID=your_twilio_account_sid
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TWILIO_AUTH_TOKEN=your_twilio_auth_token
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TWILIO_FROM_NUMBER=+1234567890
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TWILIO_TO_NUMBER=+0987654321
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# Optional: Custom conda installation (for academic/lab environments)
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# Example: CONDA_PREFIX=/path/to/miniconda3
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CONDA_PREFIX=
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# Optional: Additional conda directories (space-separated list)
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# Directories are mounted to the same path inside the container
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# Automatic detection:
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# - Paths with "*env*" are added to CONDA_ENVS_DIRS (for environments)
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# - Paths with "*pkg*" are added to CONDA_PKGS_DIRS (for package cache)
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# Example: CONDA_EXTRA_DIRS="/vol/lab/username/.conda/envs /vol/lab/username/conda_envs /vol/lab/username/.conda/pkgs /vol/lab/username/conda_pkgs"
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CONDA_EXTRA_DIRS=
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# Optional: System packages to install in Docker container (space-separated)
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# Common scientific packages: libopenslide0 libgdal-dev libproj-dev libopencv-dev
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# Example: SYSTEM_PACKAGES="libopenslide0 libgdal-dev"
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SYSTEM_PACKAGES= |